Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Rubie-203ENSMUST00000227803 2430 ntBASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps9d1Q8C190 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm12485-201ENSMUST00000119641 291 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm9797-201ENSMUST00000052902 613 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm5161-201ENSMUST00000075243 853 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gm24447-201ENSMUST00000083977 338 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps9d1Q8C190 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps9d1Q8C190 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms