Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm13369-201ENSMUST00000119442 987 ntBASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm37497-201ENSMUST00000195830 798 ntBASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gm5035-201ENSMUST00000215581 927 ntBASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trub1Q8C0D0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Gm12291-201ENSMUST00000121627 311 ntBASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.37□□□□□ -0.27
Trub1Q8C0D0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm16479-201ENSMUST00000121706 932 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm27486-201ENSMUST00000184923 80 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm7653-201ENSMUST00000214567 508 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trub1Q8C0D0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trub1Q8C0D0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms