Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim35Q8C006 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim35Q8C006 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm12874-201ENSMUST00000117190 913 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm15916-201ENSMUST00000118355 736 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm5742-201ENSMUST00000120764 505 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Zfp572-202ENSMUST00000184208 1078 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm37439-201ENSMUST00000193150 856 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Pdlim5-209ENSMUST00000196908 1196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm43396-201ENSMUST00000197506 706 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim35Q8C006 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Trim35Q8C006 CT030254.3-201ENSMUST00000225959 1231 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Tctex1d2-202ENSMUST00000080316 720 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC14.29□□□□□ -0.12
Trim35Q8C006 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim35Q8C006 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim35Q8C006 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim35Q8C006 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.28□□□□□ -0.12
Trim35Q8C006 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim35Q8C006 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm27920-201ENSMUST00000183953 96 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm37630-201ENSMUST00000194210 1456 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm42733-201ENSMUST00000201272 519 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 AC132384.7-201ENSMUST00000220198 1391 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 AC102689.1-201ENSMUST00000220511 1090 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms