Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Gm5525-201ENSMUST00000190438 1312 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Gm18038-201ENSMUST00000197900 485 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Gm4797-201ENSMUST00000219075 1283 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Mir7686-201ENSMUST00000200604 57 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gm4482-201ENSMUST00000200876 742 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 AC132901.1-201ENSMUST00000224345 508 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gm1821-202ENSMUST00000227415 750 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 AC159103.1-201ENSMUST00000228325 429 ntBASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col16a1Q8BLX7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm11989-201ENSMUST00000117240 672 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm11362-201ENSMUST00000118838 850 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm12501-201ENSMUST00000119163 529 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm12196-201ENSMUST00000120954 262 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm6407-201ENSMUST00000176468 549 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm44958-201ENSMUST00000203734 736 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Olfr1347-205ENSMUST00000220413 964 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Ginm1-202ENSMUST00000065124 300 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.67■□□□□ 0.26
Col16a1Q8BLX7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.66■□□□□ 0.26
Col16a1Q8BLX7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms