Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm12928-201ENSMUST00000117115 573 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm14928-201ENSMUST00000120198 477 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm11918-201ENSMUST00000121660 179 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm2495-201ENSMUST00000191160 466 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn3Q8BHH8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Matn2-203ENSMUST00000226766 3252 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm6152-201ENSMUST00000151704 340 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm23984-201ENSMUST00000157139 203 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm6745-201ENSMUST00000199216 526 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm16372-201ENSMUST00000073088 450 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Map1b-203ENSMUST00000223725 2669 ntBASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn3Q8BHH8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Clrn3Q8BHH8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms