Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm7775-201ENSMUST00000218871 853 ntBASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.8□□□□□ -0.2
Trim6Q8BGE7 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm24447-201ENSMUST00000083977 338 ntBASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim6Q8BGE7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Gm12485-201ENSMUST00000119641 291 ntBASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Gm9063-201ENSMUST00000223299 582 ntBASIC13.79□□□□□ -0.2
Trim6Q8BGE7 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Gm5161-201ENSMUST00000075243 853 ntBASIC13.79□□□□□ -0.2
Trim6Q8BGE7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim6Q8BGE7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Gm38144-201ENSMUST00000192790 465 ntBASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms