Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.57□□□□□ -0.72
Vma21Q78T54 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.56□□□□□ -0.72
Vma21Q78T54 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Vma21Q78T54 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.56□□□□□ -0.72
Vma21Q78T54 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Vma21Q78T54 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Vma21Q78T54 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.56□□□□□ -0.72
Vma21Q78T54 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vma21Q78T54 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Vma21Q78T54 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Vma21Q78T54 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Vma21Q78T54 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm15487-201ENSMUST00000122373 465 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm24694-201ENSMUST00000180054 110 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Mir6956-201ENSMUST00000183598 62 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm27663-201ENSMUST00000184839 110 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm29667-201ENSMUST00000190817 490 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm38223-201ENSMUST00000194484 695 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Gm26315-201ENSMUST00000083890 321 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Vma21Q78T54 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Vma21Q78T54 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Vma21Q78T54 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.55□□□□□ -0.72
Vma21Q78T54 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.55□□□□□ -0.72
Vma21Q78T54 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.55□□□□□ -0.72
Vma21Q78T54 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vma21Q78T54 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vma21Q78T54 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Vma21Q78T54 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vma21Q78T54 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.54□□□□□ -0.72
Vma21Q78T54 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vma21Q78T54 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vma21Q78T54 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms