Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Gm43822-201ENSMUST00000200285 476 ntBASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc88cQ6VGS5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm38092-201ENSMUST00000195600 653 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm9368-201ENSMUST00000219348 831 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm26083-201ENSMUST00000157904 193 ntBASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc88cQ6VGS5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc88cQ6VGS5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Gm13492-201ENSMUST00000119772 665 ntBASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc88cQ6VGS5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms