Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm18201-201ENSMUST00000174735 875 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.95□□□□□ -0.66
Rif1Q6PR54 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.95□□□□□ -0.66
Rif1Q6PR54 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rif1Q6PR54 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm22388-201ENSMUST00000158194 248 ntBASIC10.94□□□□□ -0.66
Rif1Q6PR54 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm4482-201ENSMUST00000200876 742 ntBASIC10.94□□□□□ -0.66
Rif1Q6PR54 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.94□□□□□ -0.66
Rif1Q6PR54 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm28693-202ENSMUST00000190758 331 ntBASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.94□□□□□ -0.66
Rif1Q6PR54 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rif1Q6PR54 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Gm44443-201ENSMUST00000204396 5633 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Gm6963-201ENSMUST00000147879 379 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 Gm22442-201ENSMUST00000157256 144 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.93□□□□□ -0.66
Rif1Q6PR54 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rif1Q6PR54 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms