Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85bQ6PDY0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85bQ6PDY0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc85bQ6PDY0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc85bQ6PDY0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm13408-201ENSMUST00000119822 798 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm13935-201ENSMUST00000121859 798 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc85bQ6PDY0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm13996-201ENSMUST00000118456 430 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm25951-201ENSMUST00000175330 64 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm8885-201ENSMUST00000189382 598 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm28693-202ENSMUST00000190758 331 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.51□□□□□ -0.25
Ccdc85bQ6PDY0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Gm9540-201ENSMUST00000188230 478 ntBASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc85bQ6PDY0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms