Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chd4Q6PDQ2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm22902-201ENSMUST00000158488 302 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm20426-201ENSMUST00000173657 440 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm5455-201ENSMUST00000058710 715 ntBASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd4Q6PDQ2 Gm11989-201ENSMUST00000117240 672 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm11362-201ENSMUST00000118838 850 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm7467-201ENSMUST00000185173 652 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm45598-202ENSMUST00000210719 986 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Grk6-205ENSMUST00000224653 2976 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm12196-201ENSMUST00000120954 262 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm27627-201ENSMUST00000183644 150 ntBASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd4Q6PDQ2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Gm270-201ENSMUST00000223010 976 ntBASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd4Q6PDQ2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms