Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm12138-201ENSMUST00000122180 951 ntBASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Proscos-202ENSMUST00000178990 666 ntBASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm38671-201ENSMUST00000200573 130 ntBASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sp140Q6NSQ5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sp140Q6NSQ5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gm11918-201ENSMUST00000121660 179 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gm28693-202ENSMUST00000190758 331 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gm7287-201ENSMUST00000205267 602 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gm16372-201ENSMUST00000073088 450 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sp140Q6NSQ5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms