Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.97□□□□□ -0.49
AtmQ62388 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Gm43752-201ENSMUST00000198475 697 ntBASIC11.97□□□□□ -0.49
AtmQ62388 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.97□□□□□ -0.49
AtmQ62388 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
AtmQ62388 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
AtmQ62388 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.96□□□□□ -0.49
AtmQ62388 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Gm22144-201ENSMUST00000157402 102 ntBASIC11.96□□□□□ -0.49
AtmQ62388 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
AtmQ62388 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AtmQ62388 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.96□□□□□ -0.5
AtmQ62388 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.96□□□□□ -0.5
AtmQ62388 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
AtmQ62388 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.96□□□□□ -0.5
AtmQ62388 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.96□□□□□ -0.5
AtmQ62388 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.96□□□□□ -0.5
AtmQ62388 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AtmQ62388 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.95□□□□□ -0.5
AtmQ62388 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Gm25881-201ENSMUST00000157783 103 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Gm18204-201ENSMUST00000209835 793 ntBASIC11.95□□□□□ -0.5
AtmQ62388 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.95□□□□□ -0.5
AtmQ62388 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
AtmQ62388 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Gm14585-201ENSMUST00000120713 634 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.95□□□□□ -0.5
AtmQ62388 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.95□□□□□ -0.5
AtmQ62388 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.95□□□□□ -0.5
AtmQ62388 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.95□□□□□ -0.5
AtmQ62388 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.95□□□□□ -0.5
AtmQ62388 Gm45500-201ENSMUST00000211676 803 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.95□□□□□ -0.5
AtmQ62388 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
AtmQ62388 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.95□□□□□ -0.5
AtmQ62388 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.95□□□□□ -0.5
AtmQ62388 Gm1848-201ENSMUST00000120711 789 ntBASIC11.95□□□□□ -0.5
AtmQ62388 Gm15595-201ENSMUST00000120840 961 ntBASIC11.95□□□□□ -0.5
AtmQ62388 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.95□□□□□ -0.5
AtmQ62388 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AtmQ62388 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.94□□□□□ -0.5
AtmQ62388 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
AtmQ62388 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AtmQ62388 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms