Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sox19Q62249 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Gm15693-201ENSMUST00000120470 637 ntBASIC11.06□□□□□ -0.64
Sox19Q62249 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox19Q62249 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.06□□□□□ -0.64
Sox19Q62249 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox19Q62249 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox19Q62249 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox19Q62249 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox19Q62249 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox19Q62249 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox19Q62249 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.06□□□□□ -0.64
Sox19Q62249 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Sox19Q62249 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox19Q62249 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.05□□□□□ -0.64
Sox19Q62249 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.05□□□□□ -0.64
Sox19Q62249 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox19Q62249 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Gm7774-201ENSMUST00000200064 533 ntBASIC11.05□□□□□ -0.64
Sox19Q62249 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox19Q62249 Gm5779-201ENSMUST00000218467 910 ntBASIC11.05□□□□□ -0.64
Sox19Q62249 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.05□□□□□ -0.64
Sox19Q62249 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox19Q62249 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.05□□□□□ -0.64
Sox19Q62249 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox19Q62249 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox19Q62249 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.04□□□□□ -0.64
Sox19Q62249 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.04□□□□□ -0.64
Sox19Q62249 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sox19Q62249 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox19Q62249 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox19Q62249 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sox19Q62249 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.04□□□□□ -0.64
Sox19Q62249 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Sox19Q62249 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox19Q62249 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox19Q62249 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms