Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcd1Q61466 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm11793-201ENSMUST00000120433 981 ntBASIC13.5□□□□□ -0.25
Smarcd1Q61466 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.5□□□□□ -0.25
Smarcd1Q61466 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.5□□□□□ -0.25
Smarcd1Q61466 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcd1Q61466 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.49□□□□□ -0.25
Smarcd1Q61466 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Gm14921-201ENSMUST00000118643 908 ntBASIC13.49□□□□□ -0.25
Smarcd1Q61466 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Gm45331-201ENSMUST00000209868 554 ntBASIC13.49□□□□□ -0.25
Smarcd1Q61466 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.49□□□□□ -0.25
Smarcd1Q61466 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Gm24548-201ENSMUST00000158650 108 ntBASIC13.48□□□□□ -0.25
Smarcd1Q61466 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.48□□□□□ -0.25
Smarcd1Q61466 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Mir339-201ENSMUST00000083659 96 ntBASIC13.48□□□□□ -0.25
Smarcd1Q61466 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcd1Q61466 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms