Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.5□□□□□ -0.25
Satb1Q60611 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12624-201ENSMUST00000177615 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12621-201ENSMUST00000177760 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12615-201ENSMUST00000177970 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12622-201ENSMUST00000177975 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12627-201ENSMUST00000178412 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12625-201ENSMUST00000179122 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12614-201ENSMUST00000179586 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm12613-201ENSMUST00000180323 382 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm3508-201ENSMUST00000186012 792 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.5□□□□□ -0.25
Satb1Q60611 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.5□□□□□ -0.25
Satb1Q60611 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.5□□□□□ -0.25
Satb1Q60611 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Satb1Q60611 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Satb1Q60611 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Satb1Q60611 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Satb1Q60611 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.49□□□□□ -0.25
Satb1Q60611 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Satb1Q60611 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Gm27438-201ENSMUST00000183480 110 ntBASIC13.49□□□□□ -0.25
Satb1Q60611 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.49□□□□□ -0.25
Satb1Q60611 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.49□□□□□ -0.25
Satb1Q60611 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Satb1Q60611 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.49□□□□□ -0.25
Satb1Q60611 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Satb1Q60611 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Satb1Q60611 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 Acot6-202ENSMUST00000222921 3622 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 Mir1943-201ENSMUST00000158276 73 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.48□□□□□ -0.25
Satb1Q60611 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 Gm2445-201ENSMUST00000182798 989 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 Gm37835-201ENSMUST00000193305 361 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.48□□□□□ -0.25
Satb1Q60611 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.48□□□□□ -0.25
Satb1Q60611 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Satb1Q60611 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms