Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3-3Q5R1C3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3-3Q5R1C3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Gm27920-201ENSMUST00000183953 96 ntBASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Gm44124-201ENSMUST00000204159 472 ntBASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Gm10819-201ENSMUST00000099988 561 ntBASIC9.71□□□□□ -0.86
Trav3-3Q5R1C3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms