Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Gm23699-201ENSMUST00000158835 135 ntBASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Gm8194-201ENSMUST00000159783 859 ntBASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mdc1Q5PSV9 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Gm27552-201ENSMUST00000183351 62 ntBASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Gm27844-201ENSMUST00000183613 62 ntBASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Gm44958-201ENSMUST00000203734 736 ntBASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mdc1Q5PSV9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Mdc1Q5PSV9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.71■□□□□ 0.26
Mdc1Q5PSV9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Mdc1Q5PSV9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.71■□□□□ 0.26
Mdc1Q5PSV9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Mdc1Q5PSV9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm24934-201ENSMUST00000103764 111 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm13408-201ENSMUST00000119822 798 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm13935-201ENSMUST00000121859 798 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm7003-201ENSMUST00000195089 312 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm45433-201ENSMUST00000209386 247 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Spcs1-203ENSMUST00000226374 592 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm10076-201ENSMUST00000073238 384 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm17040-202ENSMUST00000170597 889 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm6407-201ENSMUST00000176468 549 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Gm9996-201ENSMUST00000070359 913 ntBASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mdc1Q5PSV9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mdc1Q5PSV9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mdc1Q5PSV9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Mdc1Q5PSV9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mdc1Q5PSV9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mdc1Q5PSV9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mdc1Q5PSV9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms