Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm5425-201ENSMUST00000214125 459 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim40Q3UWA4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Gm25144-201ENSMUST00000179561 110 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Gm25352-201ENSMUST00000179815 110 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Gm46209-201ENSMUST00000217912 553 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Chchd1-203ENSMUST00000224633 557 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim40Q3UWA4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm12585-201ENSMUST00000117307 290 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim40Q3UWA4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms