Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fam196aQ3USH1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Gm6254-201ENSMUST00000168178 1072 ntBASIC13□□□□□ -0.33
Fam196aQ3USH1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13□□□□□ -0.33
Fam196aQ3USH1 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Gm19287-201ENSMUST00000203190 358 ntBASIC13□□□□□ -0.33
Fam196aQ3USH1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Gm45550-201ENSMUST00000209380 946 ntBASIC13□□□□□ -0.33
Fam196aQ3USH1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13□□□□□ -0.33
Fam196aQ3USH1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fam196aQ3USH1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Gm15711-201ENSMUST00000118889 535 ntBASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Gm9358-201ENSMUST00000183067 927 ntBASIC12.99□□□□□ -0.33
Fam196aQ3USH1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.99□□□□□ -0.33
Fam196aQ3USH1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms