Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Gm27437-201ENSMUST00000183429 107 ntBASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Gm18351-201ENSMUST00000188646 883 ntBASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shisa3Q3UPR0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm16215-201ENSMUST00000161990 637 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm20445-201ENSMUST00000061905 565 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa3Q3UPR0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Gm15321-201ENSMUST00000121290 288 ntBASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shisa3Q3UPR0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms