Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upf3bQ3ULL6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Upf3bQ3ULL6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Mir686-201ENSMUST00000102174 109 ntBASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Gm43433-201ENSMUST00000196573 481 ntBASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upf3bQ3ULL6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Gm13829-201ENSMUST00000119600 138 ntBASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upf3bQ3ULL6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm11637-201ENSMUST00000120601 592 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm16177-201ENSMUST00000120728 718 ntBASIC13.87□□□□□ -0.19
Upf3bQ3ULL6 Gm16479-201ENSMUST00000121706 932 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms