Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.03□□□□□ -0.16
Col9a2Q07643 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Gm2546-201ENSMUST00000182630 991 ntBASIC14.03□□□□□ -0.16
Col9a2Q07643 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.03□□□□□ -0.16
Col9a2Q07643 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Gm30285-201ENSMUST00000214614 422 ntBASIC14.03□□□□□ -0.16
Col9a2Q07643 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.03□□□□□ -0.16
Col9a2Q07643 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col9a2Q07643 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col9a2Q07643 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col9a2Q07643 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm23270-201ENSMUST00000104055 131 ntBASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm11964-201ENSMUST00000120982 444 ntBASIC14.02□□□□□ -0.17
Col9a2Q07643 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.02□□□□□ -0.17
Col9a2Q07643 AU022133-201ENSMUST00000200601 873 ntBASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm21769-201ENSMUST00000211922 111 ntBASIC14.02□□□□□ -0.17
Col9a2Q07643 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Col9a2Q07643 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.02□□□□□ -0.17
Col9a2Q07643 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col9a2Q07643 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col9a2Q07643 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm23363-201ENSMUST00000175024 79 ntBASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm8099-201ENSMUST00000200510 742 ntBASIC14.01□□□□□ -0.17
Col9a2Q07643 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.01□□□□□ -0.17
Col9a2Q07643 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.01□□□□□ -0.17
Col9a2Q07643 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col9a2Q07643 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.01□□□□□ -0.17
Col9a2Q07643 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col9a2Q07643 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col9a2Q07643 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms