Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Gm22189-201ENSMUST00000103822 86 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Gm15371-201ENSMUST00000117057 784 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Gm15321-201ENSMUST00000121290 288 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Gm12151-201ENSMUST00000121374 290 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Gm11978-201ENSMUST00000122315 466 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Mir6956-201ENSMUST00000183598 62 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.34□□□□□ -0.43
Cxcr5Q04683 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cxcr5Q04683 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cxcr5Q04683 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cxcr5Q04683 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.33□□□□□ -0.44
Cxcr5Q04683 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.33□□□□□ -0.44
Cxcr5Q04683 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.33□□□□□ -0.44
Cxcr5Q04683 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cxcr5Q04683 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.32□□□□□ -0.44
Cxcr5Q04683 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.32□□□□□ -0.44
Cxcr5Q04683 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.32□□□□□ -0.44
Cxcr5Q04683 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms