Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VcpQ01853 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Gm12241-201ENSMUST00000118330 726 ntBASIC13.87□□□□□ -0.19
VcpQ01853 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.87□□□□□ -0.19
VcpQ01853 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Proscos-202ENSMUST00000178990 666 ntBASIC13.87□□□□□ -0.19
VcpQ01853 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.87□□□□□ -0.19
VcpQ01853 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Rps4l-202ENSMUST00000204242 789 ntBASIC13.87□□□□□ -0.19
VcpQ01853 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Gm24447-201ENSMUST00000083977 338 ntBASIC13.87□□□□□ -0.19
VcpQ01853 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.87□□□□□ -0.19
VcpQ01853 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VcpQ01853 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.87□□□□□ -0.19
VcpQ01853 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
VcpQ01853 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VcpQ01853 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VcpQ01853 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm22323-201ENSMUST00000103832 109 ntBASIC13.86□□□□□ -0.19
VcpQ01853 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VcpQ01853 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm17376-201ENSMUST00000166016 84 ntBASIC13.86□□□□□ -0.19
VcpQ01853 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Gm27320-201ENSMUST00000184892 109 ntBASIC13.86□□□□□ -0.19
VcpQ01853 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.86□□□□□ -0.19
VcpQ01853 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.86□□□□□ -0.19
VcpQ01853 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.86□□□□□ -0.19
VcpQ01853 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VcpQ01853 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.86□□□□□ -0.19
VcpQ01853 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.86□□□□□ -0.19
VcpQ01853 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VcpQ01853 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.85□□□□□ -0.19
VcpQ01853 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VcpQ01853 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VcpQ01853 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VcpQ01853 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.85□□□□□ -0.19
VcpQ01853 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.85□□□□□ -0.19
VcpQ01853 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.85□□□□□ -0.19
VcpQ01853 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.85□□□□□ -0.19
VcpQ01853 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
VcpQ01853 Gm18473-201ENSMUST00000220543 868 ntBASIC13.85□□□□□ -0.19
VcpQ01853 Gm17330-201ENSMUST00000221047 165 ntBASIC13.85□□□□□ -0.19
VcpQ01853 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VcpQ01853 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms