Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shc1P98083 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Shc1P98083 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.68□□□□□ -0.54
Shc1P98083 Gm16479-201ENSMUST00000121706 932 ntBASIC11.68□□□□□ -0.54
Shc1P98083 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Gm40466-201ENSMUST00000212174 422 ntBASIC11.68□□□□□ -0.54
Shc1P98083 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.68□□□□□ -0.54
Shc1P98083 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.68□□□□□ -0.54
Shc1P98083 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.68□□□□□ -0.54
Shc1P98083 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.68□□□□□ -0.54
Shc1P98083 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Shc1P98083 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Shc1P98083 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.68□□□□□ -0.54
Shc1P98083 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shc1P98083 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.67□□□□□ -0.54
Shc1P98083 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.67□□□□□ -0.54
Shc1P98083 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.67□□□□□ -0.54
Shc1P98083 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.67□□□□□ -0.54
Shc1P98083 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shc1P98083 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Gm13226-201ENSMUST00000117838 404 ntBASIC11.67□□□□□ -0.54
Shc1P98083 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.67□□□□□ -0.54
Shc1P98083 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.67□□□□□ -0.54
Shc1P98083 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.67□□□□□ -0.54
Shc1P98083 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.67□□□□□ -0.54
Shc1P98083 Gm27682-201ENSMUST00000183930 110 ntBASIC11.67□□□□□ -0.54
Shc1P98083 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.67□□□□□ -0.54
Shc1P98083 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shc1P98083 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shc1P98083 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Shc1P98083 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Shc1P98083 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shc1P98083 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.66□□□□□ -0.54
Shc1P98083 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Shc1P98083 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Shc1P98083 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shc1P98083 Gm14660-201ENSMUST00000119809 575 ntBASIC11.66□□□□□ -0.54
Shc1P98083 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.66□□□□□ -0.54
Shc1P98083 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Shc1P98083 Mir7085-201ENSMUST00000184353 66 ntBASIC11.66□□□□□ -0.54
Shc1P98083 Gm27731-201ENSMUST00000185192 107 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms