Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm10268-201ENSMUST00000085340 555 ntBASIC12.29□□□□□ -0.44
Nkx3-2P97503 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.29□□□□□ -0.44
Nkx3-2P97503 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx3-2P97503 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm16202-201ENSMUST00000117532 544 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm13123-201ENSMUST00000122173 492 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm18054-201ENSMUST00000207539 555 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Paupar-201ENSMUST00000194826 3482 ntBASIC12.28□□□□□ -0.44
Nkx3-2P97503 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx3-2P97503 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx3-2P97503 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkx3-2P97503 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Gm13369-201ENSMUST00000119442 987 ntBASIC12.27□□□□□ -0.45
Nkx3-2P97503 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkx3-2P97503 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Nkx3-2P97503 Gm19184-201ENSMUST00000196798 928 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms