Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
H3f3aP84244 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H3f3aP84244 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.57□□□□□ -0.56
H3f3aP84244 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H3f3aP84244 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Gm16479-201ENSMUST00000121706 932 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
H3f3aP84244 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm26927-201ENSMUST00000182385 965 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm43433-201ENSMUST00000196573 481 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.56□□□□□ -0.56
H3f3aP84244 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.56□□□□□ -0.56
H3f3aP84244 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H3f3aP84244 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H3f3aP84244 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.55□□□□□ -0.56
H3f3aP84244 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.55□□□□□ -0.56
H3f3aP84244 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.55□□□□□ -0.56
H3f3aP84244 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
H3f3aP84244 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.55□□□□□ -0.56
H3f3aP84244 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.55□□□□□ -0.56
H3f3aP84244 Gm15824-201ENSMUST00000119516 955 ntBASIC11.55□□□□□ -0.56
H3f3aP84244 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H3f3aP84244 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.55□□□□□ -0.56
H3f3aP84244 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.55□□□□□ -0.56
H3f3aP84244 Gm43818-201ENSMUST00000200605 466 ntBASIC11.55□□□□□ -0.56
H3f3aP84244 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.55□□□□□ -0.56
H3f3aP84244 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
H3f3aP84244 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.55□□□□□ -0.56
H3f3aP84244 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.55□□□□□ -0.56
H3f3aP84244 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms