Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Gbx1P82976 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gbx1P82976 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gbx1P82976 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gbx1P82976 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.19□□□□□ -0.46
Gbx1P82976 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gbx1P82976 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.19□□□□□ -0.46
Gbx1P82976 Gm12859-201ENSMUST00000117834 427 ntBASIC12.19□□□□□ -0.46
Gbx1P82976 Gm15429-201ENSMUST00000151268 798 ntBASIC12.19□□□□□ -0.46
Gbx1P82976 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.19□□□□□ -0.46
Gbx1P82976 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Gbx1P82976 Gm27437-201ENSMUST00000183429 107 ntBASIC12.19□□□□□ -0.46
Gbx1P82976 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.19□□□□□ -0.46
Gbx1P82976 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.19□□□□□ -0.46
Gbx1P82976 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.19□□□□□ -0.46
Gbx1P82976 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gbx1P82976 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.18□□□□□ -0.46
Gbx1P82976 Gm7488-201ENSMUST00000117148 684 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 Mir6392-201ENSMUST00000184924 108 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Gm2495-201ENSMUST00000191160 466 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 Itm2b-204ENSMUST00000228637 783 ntBASIC12.18□□□□□ -0.46
Gbx1P82976 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gbx1P82976 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gbx1P82976 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.18□□□□□ -0.46
Gbx1P82976 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gbx1P82976 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.18□□□□□ -0.46
Gbx1P82976 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Gbx1P82976 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gbx1P82976 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms