Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.23□□□□□ -0.61
Atf1P81269 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Gm44069-201ENSMUST00000204898 506 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.23□□□□□ -0.61
Atf1P81269 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.23□□□□□ -0.61
Atf1P81269 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Gm15823-201ENSMUST00000064305 670 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Gm16372-201ENSMUST00000073088 450 ntBASIC11.23□□□□□ -0.61
Atf1P81269 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Atf1P81269 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atf1P81269 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Atf1P81269 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Atf1P81269 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atf1P81269 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf1P81269 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.23□□□□□ -0.61
Atf1P81269 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.22□□□□□ -0.61
Atf1P81269 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Gm6152-201ENSMUST00000151704 340 ntBASIC11.22□□□□□ -0.61
Atf1P81269 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Atf1P81269 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Atf1P81269 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Atf1P81269 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.22□□□□□ -0.61
Atf1P81269 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.22□□□□□ -0.61
Atf1P81269 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.22□□□□□ -0.61
Atf1P81269 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.22□□□□□ -0.61
Atf1P81269 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.22□□□□□ -0.61
Atf1P81269 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atf1P81269 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atf1P81269 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Atf1P81269 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.21□□□□□ -0.61
Atf1P81269 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.21□□□□□ -0.61
Atf1P81269 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.21□□□□□ -0.61
Atf1P81269 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Atf1P81269 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.21□□□□□ -0.61
Atf1P81269 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Atf1P81269 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atf1P81269 Mir686-201ENSMUST00000102174 109 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms