Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CiitaP79621 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CiitaP79621 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.04□□□□□ -0.16
CiitaP79621 Gm14921-201ENSMUST00000118643 908 ntBASIC14.04□□□□□ -0.16
CiitaP79621 Gm12502-201ENSMUST00000120197 444 ntBASIC14.04□□□□□ -0.16
CiitaP79621 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Gm23363-201ENSMUST00000175024 79 ntBASIC14.04□□□□□ -0.16
CiitaP79621 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.04□□□□□ -0.16
CiitaP79621 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.04□□□□□ -0.16
CiitaP79621 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CiitaP79621 Olfr582-201ENSMUST00000098212 960 ntBASIC14.04□□□□□ -0.16
CiitaP79621 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.04□□□□□ -0.16
CiitaP79621 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CiitaP79621 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CiitaP79621 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CiitaP79621 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.03□□□□□ -0.16
CiitaP79621 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.03□□□□□ -0.16
CiitaP79621 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CiitaP79621 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CiitaP79621 Gm38266-201ENSMUST00000194931 421 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Gm3961-201ENSMUST00000204425 994 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Gm10608-202ENSMUST00000213924 676 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Gm9368-201ENSMUST00000219348 831 ntBASIC14.03□□□□□ -0.16
CiitaP79621 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CiitaP79621 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.03□□□□□ -0.16
CiitaP79621 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CiitaP79621 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CiitaP79621 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
CiitaP79621 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CiitaP79621 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms