Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Traf6P70196 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Traf6P70196 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Traf6P70196 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.81□□□□□ -0.36
Traf6P70196 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.81□□□□□ -0.36
Traf6P70196 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.81□□□□□ -0.36
Traf6P70196 Gm26315-201ENSMUST00000083890 321 ntBASIC12.81□□□□□ -0.36
Traf6P70196 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Traf6P70196 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.81□□□□□ -0.36
Traf6P70196 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.81□□□□□ -0.36
Traf6P70196 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Traf6P70196 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf6P70196 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Traf6P70196 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.8□□□□□ -0.36
Traf6P70196 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Traf6P70196 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.8□□□□□ -0.36
Traf6P70196 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Traf6P70196 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Traf6P70196 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Traf6P70196 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Traf6P70196 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.8□□□□□ -0.36
Traf6P70196 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Traf6P70196 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Traf6P70196 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.79□□□□□ -0.36
Traf6P70196 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Traf6P70196 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms