Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lsm6P62313 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Lsm6P62313 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Gm11618-201ENSMUST00000117946 267 ntBASIC11.4□□□□□ -0.58
Lsm6P62313 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.4□□□□□ -0.58
Lsm6P62313 Gm10156-201ENSMUST00000122364 462 ntBASIC11.4□□□□□ -0.58
Lsm6P62313 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Lsm6P62313 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Gm17794-201ENSMUST00000220252 955 ntBASIC11.4□□□□□ -0.58
Lsm6P62313 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.4□□□□□ -0.58
Lsm6P62313 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lsm6P62313 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.4□□□□□ -0.58
Lsm6P62313 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.4□□□□□ -0.59
Lsm6P62313 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm6P62313 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Lsm6P62313 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm6P62313 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm6P62313 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Lsm6P62313 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.39□□□□□ -0.59
Lsm6P62313 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Mir1894-201ENSMUST00000122802 81 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Gm28693-202ENSMUST00000190758 331 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.39□□□□□ -0.59
Lsm6P62313 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.39□□□□□ -0.59
Lsm6P62313 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm6P62313 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm6P62313 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lsm6P62313 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.38□□□□□ -0.59
Lsm6P62313 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lsm6P62313 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm6P62313 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Lsm6P62313 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lsm6P62313 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm6P62313 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.38□□□□□ -0.59
Lsm6P62313 Gm9002-201ENSMUST00000178437 499 ntBASIC11.38□□□□□ -0.59
Lsm6P62313 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.38□□□□□ -0.59
Lsm6P62313 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm6P62313 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.38□□□□□ -0.59
Lsm6P62313 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.38□□□□□ -0.59
Lsm6P62313 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms