Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Rubie-203ENSMUST00000227803 2430 ntBASIC12.45□□□□□ -0.42
Sox3P53784 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox3P53784 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox3P53784 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox3P53784 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.45□□□□□ -0.42
Sox3P53784 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Gm26927-201ENSMUST00000182385 965 ntBASIC12.45□□□□□ -0.42
Sox3P53784 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Gm38158-201ENSMUST00000194617 339 ntBASIC12.45□□□□□ -0.42
Sox3P53784 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.45□□□□□ -0.42
Sox3P53784 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.45□□□□□ -0.42
Sox3P53784 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sox3P53784 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sox3P53784 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox3P53784 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox3P53784 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sox3P53784 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.44□□□□□ -0.42
Sox3P53784 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox3P53784 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.44□□□□□ -0.42
Sox3P53784 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox3P53784 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox3P53784 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox3P53784 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sox3P53784 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox3P53784 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox3P53784 Gm44608-201ENSMUST00000206827 855 ntBASIC12.44□□□□□ -0.42
Sox3P53784 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Gm10268-201ENSMUST00000085340 555 ntBASIC12.44□□□□□ -0.42
Sox3P53784 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox3P53784 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Sox3P53784 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox3P53784 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Sox3P53784 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox3P53784 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox3P53784 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Sox3P53784 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.43□□□□□ -0.42
Sox3P53784 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms