Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sox18P43680 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox18P43680 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox18P43680 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.54□□□□□ -0.4
Sox18P43680 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox18P43680 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox18P43680 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.54□□□□□ -0.4
Sox18P43680 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sox18P43680 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox18P43680 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox18P43680 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sox18P43680 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.54□□□□□ -0.4
Sox18P43680 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox18P43680 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sox18P43680 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.53□□□□□ -0.4
Sox18P43680 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm14539-201ENSMUST00000117527 174 ntBASIC12.53□□□□□ -0.4
Sox18P43680 Gm13813-201ENSMUST00000120998 787 ntBASIC12.53□□□□□ -0.4
Sox18P43680 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm8738-201ENSMUST00000172606 329 ntBASIC12.53□□□□□ -0.4
Sox18P43680 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Gm20239-201ENSMUST00000196610 982 ntBASIC12.53□□□□□ -0.4
Sox18P43680 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.53□□□□□ -0.4
Sox18P43680 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox18P43680 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.53□□□□□ -0.4
Sox18P43680 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sox18P43680 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.53□□□□□ -0.4
Sox18P43680 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sox18P43680 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox18P43680 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms