Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc6a13P31649 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc6a13P31649 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Gm26185-201ENSMUST00000157692 266 ntBASIC13.15□□□□□ -0.3
Slc6a13P31649 Gm17208-201ENSMUST00000168388 535 ntBASIC13.15□□□□□ -0.3
Slc6a13P31649 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Gm18187-201ENSMUST00000196476 984 ntBASIC13.15□□□□□ -0.3
Slc6a13P31649 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.15□□□□□ -0.3
Slc6a13P31649 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.15□□□□□ -0.3
Slc6a13P31649 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Slc6a13P31649 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc6a13P31649 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Slc6a13P31649 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm11637-201ENSMUST00000120601 592 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm1335-201ENSMUST00000121653 386 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc6a13P31649 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm40466-201ENSMUST00000212174 422 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Gm32025-201ENSMUST00000217960 307 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc6a13P31649 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.14□□□□□ -0.31
Slc6a13P31649 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc6a13P31649 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc6a13P31649 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Gm13829-201ENSMUST00000119600 138 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Gm12291-201ENSMUST00000121627 311 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Gm22121-201ENSMUST00000175148 54 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.13□□□□□ -0.31
Slc6a13P31649 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.13□□□□□ -0.31
Slc6a13P31649 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Slc6a13P31649 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc6a13P31649 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms