Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Cd28P31041 Gm4995-201ENSMUST00000117247 432 ntBASIC11.43□□□□□ -0.58
Cd28P31041 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cd28P31041 Gm3436-201ENSMUST00000179930 840 ntBASIC11.43□□□□□ -0.58
Cd28P31041 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cd28P31041 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.43□□□□□ -0.58
Cd28P31041 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.43□□□□□ -0.58
Cd28P31041 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.43□□□□□ -0.58
Cd28P31041 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.43□□□□□ -0.58
Cd28P31041 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.43□□□□□ -0.58
Cd28P31041 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.43□□□□□ -0.58
Cd28P31041 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd28P31041 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.42□□□□□ -0.58
Cd28P31041 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Cd28P31041 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.42□□□□□ -0.58
Cd28P31041 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.42□□□□□ -0.58
Cd28P31041 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Cd28P31041 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.42□□□□□ -0.58
Cd28P31041 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cd28P31041 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cd28P31041 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd28P31041 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cd28P31041 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cd28P31041 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.41□□□□□ -0.58
Cd28P31041 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd28P31041 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Cd28P31041 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Cd28P31041 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.41□□□□□ -0.58
Cd28P31041 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cd28P31041 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cd28P31041 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms