Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col2a1P28481 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.52□□□□□ -0.08
Col2a1P28481 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Col2a1P28481 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Col2a1P28481 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Col2a1P28481 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Col2a1P28481 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.52□□□□□ -0.08
Col2a1P28481 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.52□□□□□ -0.08
Col2a1P28481 Gm24749-201ENSMUST00000157838 343 ntBASIC14.52□□□□□ -0.08
Col2a1P28481 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.52□□□□□ -0.08
Col2a1P28481 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.52□□□□□ -0.08
Col2a1P28481 Gm8385-201ENSMUST00000058999 643 ntBASIC14.52□□□□□ -0.08
Col2a1P28481 Gm9996-201ENSMUST00000070359 913 ntBASIC14.52□□□□□ -0.08
Col2a1P28481 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.52□□□□□ -0.08
Col2a1P28481 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.52□□□□□ -0.08
Col2a1P28481 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col2a1P28481 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Col2a1P28481 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Col2a1P28481 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col2a1P28481 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Gm12217-201ENSMUST00000118858 696 ntBASIC14.51□□□□□ -0.09
Col2a1P28481 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col2a1P28481 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.51□□□□□ -0.09
Col2a1P28481 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.51□□□□□ -0.09
Col2a1P28481 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col2a1P28481 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col2a1P28481 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col2a1P28481 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col2a1P28481 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col2a1P28481 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col2a1P28481 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col2a1P28481 Gm23200-201ENSMUST00000104379 132 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm5616-201ENSMUST00000165252 384 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Gm8741-201ENSMUST00000174736 384 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col2a1P28481 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Col2a1P28481 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col2a1P28481 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.5□□□□□ -0.09
Col2a1P28481 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col2a1P28481 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms