Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.01□□□□□ -0.49
Cd40lgP27548 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cd40lgP27548 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Cd40lgP27548 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cd40lgP27548 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cd40lgP27548 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.01□□□□□ -0.49
Cd40lgP27548 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cd40lgP27548 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cd40lgP27548 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12□□□□□ -0.49
Cd40lgP27548 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cd40lgP27548 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cd40lgP27548 Gm27196-201ENSMUST00000184787 2582 ntBASIC12□□□□□ -0.49
Cd40lgP27548 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Cd40lgP27548 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12□□□□□ -0.49
Cd40lgP27548 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cd40lgP27548 Gm27847-201ENSMUST00000183711 107 ntBASIC12□□□□□ -0.49
Cd40lgP27548 Gm27375-201ENSMUST00000183799 107 ntBASIC12□□□□□ -0.49
Cd40lgP27548 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Gm29608-201ENSMUST00000190444 463 ntBASIC12□□□□□ -0.49
Cd40lgP27548 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12□□□□□ -0.49
Cd40lgP27548 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12□□□□□ -0.49
Cd40lgP27548 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12□□□□□ -0.49
Cd40lgP27548 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12□□□□□ -0.49
Cd40lgP27548 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cd40lgP27548 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12□□□□□ -0.49
Cd40lgP27548 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cd40lgP27548 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12□□□□□ -0.49
Cd40lgP27548 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cd40lgP27548 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cd40lgP27548 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.99□□□□□ -0.49
Cd40lgP27548 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.99□□□□□ -0.49
Cd40lgP27548 Gm13612-201ENSMUST00000119276 390 ntBASIC11.99□□□□□ -0.49
Cd40lgP27548 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.99□□□□□ -0.49
Cd40lgP27548 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cd40lgP27548 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cd40lgP27548 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cd40lgP27548 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms