Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Gm13226-201ENSMUST00000117838 404 ntBASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Gm28196-201ENSMUST00000187719 640 ntBASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Gm45784-201ENSMUST00000188360 142 ntBASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Gm18062-201ENSMUST00000208020 547 ntBASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Gm18055-201ENSMUST00000208254 547 ntBASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Tnfrsf1bP25119 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Gm1335-201ENSMUST00000121653 386 ntBASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Gm10268-201ENSMUST00000085340 555 ntBASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf1bP25119 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Mir686-201ENSMUST00000102174 109 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Gm12384-201ENSMUST00000119228 919 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Gm14660-201ENSMUST00000119809 575 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Gm27682-201ENSMUST00000183930 110 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms