Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.16□□□□□ -0.46
Nid1P10493 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.16□□□□□ -0.46
Nid1P10493 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Nid1P10493 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nid1P10493 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nid1P10493 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.15□□□□□ -0.46
Nid1P10493 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.15□□□□□ -0.46
Nid1P10493 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.15□□□□□ -0.46
Nid1P10493 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nid1P10493 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nid1P10493 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.15□□□□□ -0.46
Nid1P10493 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.15□□□□□ -0.46
Nid1P10493 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Gm10576-201ENSMUST00000191927 825 ntBASIC12.15□□□□□ -0.46
Nid1P10493 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.15□□□□□ -0.46
Nid1P10493 Gm7287-201ENSMUST00000205267 602 ntBASIC12.15□□□□□ -0.46
Nid1P10493 Gm8598-201ENSMUST00000221184 836 ntBASIC12.15□□□□□ -0.46
Nid1P10493 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nid1P10493 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Nid1P10493 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nid1P10493 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nid1P10493 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nid1P10493 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Nid1P10493 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nid1P10493 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.14□□□□□ -0.47
Nid1P10493 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 Gm11618-201ENSMUST00000117946 267 ntBASIC12.14□□□□□ -0.47
Nid1P10493 Gm10156-201ENSMUST00000122364 462 ntBASIC12.14□□□□□ -0.47
Nid1P10493 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.14□□□□□ -0.47
Nid1P10493 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nid1P10493 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.14□□□□□ -0.47
Nid1P10493 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nid1P10493 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nid1P10493 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nid1P10493 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nid1P10493 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nid1P10493 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.13□□□□□ -0.47
Nid1P10493 Gm8213-201ENSMUST00000118191 441 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms