Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Gm37751-201ENSMUST00000192440 1198 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ly6c1P0CW02 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Gm12384-201ENSMUST00000119228 919 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Gm9440-201ENSMUST00000119667 539 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Gm19931-201ENSMUST00000198920 368 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.92□□□□□ -0.66
Ly6c1P0CW02 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ly6c1P0CW02 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms