Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm11814-201ENSMUST00000119515 929 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm15824-201ENSMUST00000119516 955 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.15□□□□□ -0.15
Chmp6P0C0A3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chmp6P0C0A3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm14350-201ENSMUST00000116642 640 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm17150-201ENSMUST00000165577 381 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm43433-201ENSMUST00000196573 481 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp6P0C0A3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms