Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxa6P09092 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Gm43133-201ENSMUST00000197472 463 ntBASIC11.22□□□□□ -0.61
Hoxa6P09092 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxa6P09092 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxa6P09092 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Gm19163-201ENSMUST00000223313 780 ntBASIC11.22□□□□□ -0.61
Hoxa6P09092 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxa6P09092 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.22□□□□□ -0.61
Hoxa6P09092 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa6P09092 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa6P09092 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa6P09092 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.22□□□□□ -0.61
Hoxa6P09092 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa6P09092 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.21□□□□□ -0.61
Hoxa6P09092 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm27501-201ENSMUST00000183599 107 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Mir7221-201ENSMUST00000184009 72 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxa6P09092 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.21□□□□□ -0.61
Hoxa6P09092 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm3961-201ENSMUST00000204425 994 ntBASIC11.21□□□□□ -0.61
Hoxa6P09092 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa6P09092 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa6P09092 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Hoxa6P09092 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxa6P09092 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxa6P09092 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Hoxa6P09092 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Hoxa6P09092 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hoxa6P09092 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Hoxa6P09092 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hoxa6P09092 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.2□□□□□ -0.62
Hoxa6P09092 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hoxa6P09092 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms