Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col4a1P02463 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.61■□□□□ 0.09
Col4a1P02463 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.61■□□□□ 0.09
Col4a1P02463 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Col4a1P02463 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Col4a1P02463 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.61■□□□□ 0.09
Col4a1P02463 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Col4a1P02463 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.61■□□□□ 0.09
Col4a1P02463 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col4a1P02463 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.6■□□□□ 0.09
Col4a1P02463 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.6■□□□□ 0.09
Col4a1P02463 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.6■□□□□ 0.09
Col4a1P02463 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.6■□□□□ 0.09
Col4a1P02463 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm18304-201ENSMUST00000189162 546 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 AY036118-201ENSMUST00000200021 923 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Col4a1P02463 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col4a1P02463 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Col4a1P02463 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm12266-201ENSMUST00000120311 962 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Gm11450-201ENSMUST00000121144 333 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Gm14760-201ENSMUST00000121831 999 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm9211-201ENSMUST00000182882 975 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.6■□□□□ 0.09
Col4a1P02463 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.6■□□□□ 0.09
Col4a1P02463 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col4a1P02463 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
Col4a1P02463 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col4a1P02463 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Col4a1P02463 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Col4a1P02463 Gm11989-201ENSMUST00000117240 672 ntBASIC15.59■□□□□ 0.09
Col4a1P02463 Gm11362-201ENSMUST00000118838 850 ntBASIC15.59■□□□□ 0.09
Col4a1P02463 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col4a1P02463 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms