Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.03□□□□□ -0.16
Tp53P02340 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tp53P02340 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tp53P02340 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tp53P02340 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tp53P02340 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tp53P02340 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tp53P02340 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tp53P02340 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Tp53P02340 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Tp53P02340 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tp53P02340 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Mir1982-201ENSMUST00000157368 74 ntBASIC14.02□□□□□ -0.17
Tp53P02340 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.02□□□□□ -0.17
Tp53P02340 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.02□□□□□ -0.17
Tp53P02340 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tp53P02340 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tp53P02340 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tp53P02340 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.02□□□□□ -0.17
Tp53P02340 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tp53P02340 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tp53P02340 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Tp53P02340 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.01□□□□□ -0.17
Tp53P02340 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.01□□□□□ -0.17
Tp53P02340 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tp53P02340 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.01□□□□□ -0.17
Tp53P02340 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.01□□□□□ -0.17
Tp53P02340 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.01□□□□□ -0.17
Tp53P02340 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.01□□□□□ -0.17
Tp53P02340 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tp53P02340 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tp53P02340 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tp53P02340 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tp53P02340 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.01□□□□□ -0.17
Tp53P02340 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tp53P02340 Gm8617-201ENSMUST00000118796 2222 ntBASIC14□□□□□ -0.17
Tp53P02340 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14□□□□□ -0.17
Tp53P02340 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Zscan30-202ENSMUST00000224144 1458 ntBASIC14□□□□□ -0.17
Tp53P02340 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14□□□□□ -0.17
Tp53P02340 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14□□□□□ -0.17
Tp53P02340 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tp53P02340 Gm12390-201ENSMUST00000117897 397 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms