Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm25951-201ENSMUST00000175330 64 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 Gm43916-201ENSMUST00000205062 967 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.53□□□□□ -0.56
Col5a1O88207 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.53□□□□□ -0.56
Col5a1O88207 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col5a1O88207 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm13315-201ENSMUST00000120376 991 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm24845-201ENSMUST00000158034 109 ntBASIC11.53□□□□□ -0.56
Col5a1O88207 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Col5a1O88207 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Col5a1O88207 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Col5a1O88207 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Col5a1O88207 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col5a1O88207 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col5a1O88207 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Col5a1O88207 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Col5a1O88207 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col5a1O88207 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.52□□□□□ -0.57
Col5a1O88207 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.52□□□□□ -0.57
Col5a1O88207 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.52□□□□□ -0.57
Col5a1O88207 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col5a1O88207 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col5a1O88207 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col5a1O88207 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Col5a1O88207 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col5a1O88207 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col5a1O88207 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col5a1O88207 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col5a1O88207 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms