Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.23□□□□□ -0.77
Pde6dO55057 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.23□□□□□ -0.77
Pde6dO55057 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pde6dO55057 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Pde6dO55057 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.22□□□□□ -0.77
Pde6dO55057 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm15427-201ENSMUST00000117288 531 ntBASIC10.22□□□□□ -0.77
Pde6dO55057 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.22□□□□□ -0.77
Pde6dO55057 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Mir5126-201ENSMUST00000175513 77 ntBASIC10.22□□□□□ -0.77
Pde6dO55057 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.22□□□□□ -0.77
Pde6dO55057 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.22□□□□□ -0.77
Pde6dO55057 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.22□□□□□ -0.77
Pde6dO55057 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.22□□□□□ -0.77
Pde6dO55057 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Pde6dO55057 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pde6dO55057 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Pde6dO55057 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.21□□□□□ -0.77
Pde6dO55057 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pde6dO55057 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms