Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.59□□□□□ -0.55
Alx4O35137 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.59□□□□□ -0.55
Alx4O35137 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Alx4O35137 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Alx4O35137 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Alx4O35137 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Alx4O35137 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.58□□□□□ -0.55
Alx4O35137 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Alx4O35137 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Alx4O35137 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Alx4O35137 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Alx4O35137 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 Gm27306-201ENSMUST00000183970 107 ntBASIC11.58□□□□□ -0.56
Alx4O35137 Gm38223-201ENSMUST00000194484 695 ntBASIC11.58□□□□□ -0.56
Alx4O35137 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.58□□□□□ -0.56
Alx4O35137 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Alx4O35137 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Alx4O35137 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.58□□□□□ -0.56
Alx4O35137 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.58□□□□□ -0.56
Alx4O35137 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Alx4O35137 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Alx4O35137 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.57□□□□□ -0.56
Alx4O35137 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Alx4O35137 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Mir686-201ENSMUST00000102174 109 ntBASIC11.57□□□□□ -0.56
Alx4O35137 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.57□□□□□ -0.56
Alx4O35137 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.57□□□□□ -0.56
Alx4O35137 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.57□□□□□ -0.56
Alx4O35137 Gm13813-201ENSMUST00000120998 787 ntBASIC11.57□□□□□ -0.56
Alx4O35137 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.57□□□□□ -0.56
Alx4O35137 Gm9630-201ENSMUST00000178304 885 ntBASIC11.57□□□□□ -0.56
Alx4O35137 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.57□□□□□ -0.56
Alx4O35137 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.57□□□□□ -0.56
Alx4O35137 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.57□□□□□ -0.56
Alx4O35137 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Alx4O35137 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms