Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcf11G3X9Z4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcf11G3X9Z4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcf11G3X9Z4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcf11G3X9Z4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcf11G3X9Z4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcf11G3X9Z4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Gm37986-201ENSMUST00000193285 383 ntBASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Gm26035-201ENSMUST00000083065 308 ntBASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Matn2-206ENSMUST00000228570 2798 ntBASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcf11G3X9Z4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 n-R5s14-201ENSMUST00000122688 107 ntBASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Gm8546-201ENSMUST00000178288 1264 ntBASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Gm9022-201ENSMUST00000182482 992 ntBASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcf11G3X9Z4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm13045-201ENSMUST00000119019 712 ntBASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm18393-201ENSMUST00000208349 1131 ntBASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Gm45638-201ENSMUST00000211507 2878 ntBASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcf11G3X9Z4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 AY036118-201ENSMUST00000200021 923 ntBASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 AU022133-201ENSMUST00000200601 873 ntBASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcf11G3X9Z4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Gm7848-201ENSMUST00000210739 718 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Gm45770-201ENSMUST00000212105 616 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Olfr1347-205ENSMUST00000220413 964 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms